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Form 16 vs Form 16A: which certificate, whose job, by when

Arthora Guides · Updated August 2026 · 6 min read

Every rupee of TDS you deduct belongs to someone else's tax account, and the certificate is your proof that you delivered it there. Employees get Form 16; everyone else you deduct from — the landlord, the contractor, the consultant — gets Form 16A. Businesses mix the two up constantly, usually in June, usually at speed. Here is the clean separation.

The two certificates, side by side

Form 16Form 16A
CoversTDS on salary (Section 192)TDS on everything non-salary — rent, contractor bills, professional fees, interest, commission
Flows fromYour 24Q returnsYour 26Q (and 27Q) returns
IssuedOnce a year, by 15 JuneEvery quarter, within 15 days of the return's due date
Goes toEach employeeEach vendor/payee you deducted from

Inside Form 16: Part A and Part B

Form 16A has no Part B — it is entirely a TRACES document: deductor, deductee, amount paid, TDS deposited, challan references, per quarter.

The employee/vendor side: 26AS and AIS

Every certificate you issue has a mirror: the payee's Form 26AS (and the broader AIS), which shows all tax deposited against their PAN. Before anyone files an ITR they reconcile certificate against 26AS — so when your certificate and their 26AS disagree, you get the phone call. The disagreement always has one of three causes:

  1. You deposited late — the credit appears in a later period than the payee expects.
  2. A wrong PAN in your return — the credit went to a stranger's account; fix it with a correction statement, not an apology.
  3. A challan mismatch — the return claimed a deposit the bank recorded differently; TRACES shows this as a default on your side.
💡 The June rule: Form 16 can only be generated after the Q4 24Q (due 31 May) is filed and processed. File 24Q on 30 May and TRACES may still be processing when employees start asking on 5 June. File in the first week of May and June is quiet. The deadline chain runs backward from 15 June, and the slack in it is yours to keep or spend.
How Arthora ERP does this: because payroll, the 24Q and Form 16 Part B are generated from the same salary runs, Part B and Annexure II cannot disagree — they have one source. Vendor-side deductions recorded on payments flow into 26Q, and the ERP's 26AS reconciliation shows your deposits against what TRACES holds, so the "wrong PAN" call comes from your own screen instead of an angry vendor. See the TDS module →

Quick answers

Certificates that agree with the returns behind them

Arthora ERP runs payroll, files 24Q/26Q and produces Form 16 Part B from one set of numbers. 7-day free trial, no card.